Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD34 | CD44 | ENSCAFP00000017250 | ENSCAFP00000050335 | Hematopoietic progenitor cell antigen CD34; Possible adhesion molecule with a role in early hematopoiesis by mediating the attachment of stem cells to the bone marrow extracellular matrix or directly to stromal cells. Could act as a scaffold for the attachment of lineage specific glycans, allowing stem cells to bind to lectins expressed by stromal cells or other marrow components. Presents carbohydrate ligands to selectins (By similarity). | CD44 antigen. | 0.936 |
CD34 | ICAM1 | ENSCAFP00000017250 | ENSCAFP00000026375 | Hematopoietic progenitor cell antigen CD34; Possible adhesion molecule with a role in early hematopoiesis by mediating the attachment of stem cells to the bone marrow extracellular matrix or directly to stromal cells. Could act as a scaffold for the attachment of lineage specific glycans, allowing stem cells to bind to lectins expressed by stromal cells or other marrow components. Presents carbohydrate ligands to selectins (By similarity). | Intercellular adhesion molecule 1; ICAM proteins are ligands for the leukocyte adhesion protein LFA-1 (integrin alpha-L/beta-2). During leukocyte trans-endothelial migration, ICAM1 engagement promotes the assembly of endothelial apical cups through ARHGEF26/SGEF and RHOG activation (By similarity). Belongs to the immunoglobulin superfamily. ICAM family. | 0.695 |
CD34 | MMP9 | ENSCAFP00000017250 | ENSCAFP00000035167 | Hematopoietic progenitor cell antigen CD34; Possible adhesion molecule with a role in early hematopoiesis by mediating the attachment of stem cells to the bone marrow extracellular matrix or directly to stromal cells. Could act as a scaffold for the attachment of lineage specific glycans, allowing stem cells to bind to lectins expressed by stromal cells or other marrow components. Presents carbohydrate ligands to selectins (By similarity). | Matrix metalloproteinase-9; Could play a role in bone osteoclastic resorption. Cleaves type IV and type V collagen into large C-terminal three quarter fragments and shorter N-terminal one quarter fragments (By similarity). | 0.576 |
CD34 | SELE | ENSCAFP00000017250 | ENSCAFP00000022347 | Hematopoietic progenitor cell antigen CD34; Possible adhesion molecule with a role in early hematopoiesis by mediating the attachment of stem cells to the bone marrow extracellular matrix or directly to stromal cells. Could act as a scaffold for the attachment of lineage specific glycans, allowing stem cells to bind to lectins expressed by stromal cells or other marrow components. Presents carbohydrate ligands to selectins (By similarity). | E-selectin; Cell-surface glycoprotein having a role in immunoadhesion. Mediates in the adhesion of blood neutrophils in cytokine-activated endothelium through interaction with SELPLG/PSGL1. May have a role in capillary morphogenesis. | 0.651 |
CD34 | SELP | ENSCAFP00000017250 | ENSCAFP00000033641 | Hematopoietic progenitor cell antigen CD34; Possible adhesion molecule with a role in early hematopoiesis by mediating the attachment of stem cells to the bone marrow extracellular matrix or directly to stromal cells. Could act as a scaffold for the attachment of lineage specific glycans, allowing stem cells to bind to lectins expressed by stromal cells or other marrow components. Presents carbohydrate ligands to selectins (By similarity). | Uncharacterized protein. | 0.472 |
CD34 | SPP1 | ENSCAFP00000017250 | ENSCAFP00000035550 | Hematopoietic progenitor cell antigen CD34; Possible adhesion molecule with a role in early hematopoiesis by mediating the attachment of stem cells to the bone marrow extracellular matrix or directly to stromal cells. Could act as a scaffold for the attachment of lineage specific glycans, allowing stem cells to bind to lectins expressed by stromal cells or other marrow components. Presents carbohydrate ligands to selectins (By similarity). | Secreted phosphoprotein 1. | 0.516 |
CD44 | CD34 | ENSCAFP00000050335 | ENSCAFP00000017250 | CD44 antigen. | Hematopoietic progenitor cell antigen CD34; Possible adhesion molecule with a role in early hematopoiesis by mediating the attachment of stem cells to the bone marrow extracellular matrix or directly to stromal cells. Could act as a scaffold for the attachment of lineage specific glycans, allowing stem cells to bind to lectins expressed by stromal cells or other marrow components. Presents carbohydrate ligands to selectins (By similarity). | 0.936 |
CD44 | CXCR5 | ENSCAFP00000050335 | ENSCAFP00000018310 | CD44 antigen. | C-X-C motif chemokine receptor 5; Belongs to the G-protein coupled receptor 1 family. | 0.946 |
CD44 | EZR | ENSCAFP00000050335 | ENSCAFP00000000937 | CD44 antigen. | FERM domain-containing protein. | 0.979 |
CD44 | ICAM1 | ENSCAFP00000050335 | ENSCAFP00000026375 | CD44 antigen. | Intercellular adhesion molecule 1; ICAM proteins are ligands for the leukocyte adhesion protein LFA-1 (integrin alpha-L/beta-2). During leukocyte trans-endothelial migration, ICAM1 engagement promotes the assembly of endothelial apical cups through ARHGEF26/SGEF and RHOG activation (By similarity). Belongs to the immunoglobulin superfamily. ICAM family. | 0.943 |
CD44 | MMP9 | ENSCAFP00000050335 | ENSCAFP00000035167 | CD44 antigen. | Matrix metalloproteinase-9; Could play a role in bone osteoclastic resorption. Cleaves type IV and type V collagen into large C-terminal three quarter fragments and shorter N-terminal one quarter fragments (By similarity). | 0.985 |
CD44 | MSN | ENSCAFP00000050335 | ENSCAFP00000058781 | CD44 antigen. | Moesin. | 0.948 |
CD44 | RDX | ENSCAFP00000050335 | ENSCAFP00000021092 | CD44 antigen. | Radixin. | 0.960 |
CD44 | SELE | ENSCAFP00000050335 | ENSCAFP00000022347 | CD44 antigen. | E-selectin; Cell-surface glycoprotein having a role in immunoadhesion. Mediates in the adhesion of blood neutrophils in cytokine-activated endothelium through interaction with SELPLG/PSGL1. May have a role in capillary morphogenesis. | 0.968 |
CD44 | SELP | ENSCAFP00000050335 | ENSCAFP00000033641 | CD44 antigen. | Uncharacterized protein. | 0.945 |
CD44 | SPP1 | ENSCAFP00000050335 | ENSCAFP00000035550 | CD44 antigen. | Secreted phosphoprotein 1. | 0.999 |
CXCR5 | CD44 | ENSCAFP00000018310 | ENSCAFP00000050335 | C-X-C motif chemokine receptor 5; Belongs to the G-protein coupled receptor 1 family. | CD44 antigen. | 0.946 |
EZR | CD44 | ENSCAFP00000000937 | ENSCAFP00000050335 | FERM domain-containing protein. | CD44 antigen. | 0.979 |
EZR | ICAM1 | ENSCAFP00000000937 | ENSCAFP00000026375 | FERM domain-containing protein. | Intercellular adhesion molecule 1; ICAM proteins are ligands for the leukocyte adhesion protein LFA-1 (integrin alpha-L/beta-2). During leukocyte trans-endothelial migration, ICAM1 engagement promotes the assembly of endothelial apical cups through ARHGEF26/SGEF and RHOG activation (By similarity). Belongs to the immunoglobulin superfamily. ICAM family. | 0.977 |
EZR | MMP9 | ENSCAFP00000000937 | ENSCAFP00000035167 | FERM domain-containing protein. | Matrix metalloproteinase-9; Could play a role in bone osteoclastic resorption. Cleaves type IV and type V collagen into large C-terminal three quarter fragments and shorter N-terminal one quarter fragments (By similarity). | 0.523 |
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