STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF6Ring finger protein 6. (683 aa)    
Predicted Functional Partners:
AMFR
Autocrine motility factor receptor.
   
 
 0.800
TRAPPC8
Trafficking protein particle complex 8.
   
  
 0.673
LYPLAL1
Lysophospholipase like 1.
   
  
 0.661
LARP6
La ribonucleoprotein domain family member 6.
   
  
 0.647
RNF41
Ring finger protein 41.
    
 
 0.646
DUSP12
Dual specificity phosphatase 12.
      
 0.643
WASF3
WASP family member 3.
      
 0.640
SLC35D3
Solute carrier family 35 member D3.
      
 0.636
ZNF367
Zinc finger protein 367.
   
 
 0.621
SGF29
SAGA complex associated factor 29.
   
  
 0.602
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.