STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD55Ankyrin repeat domain 55. (613 aa)    
Predicted Functional Partners:
LRATD1
LRAT domain containing 1.
      
 0.769
BRS3
Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.754
VSTM5
V-set and transmembrane domain containing 5.
      
 0.691
CLHC1
Clathrin heavy chain linker domain containing 1.
    
 
 0.661
ZDHHC19
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.655
LUZP2
Leucine zipper protein 2.
      
 0.650
GREB1
Growth regulating estrogen receptor binding 1.
      
 0.637
IFT46
Intraflagellar transport 46.
    
 
 0.622
IFT74
Intraflagellar transport 74.
   
 
 0.609
IFT52
Intraflagellar transport 52.
    
 
 0.600
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.