STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM66Tripartite motif containing 66. (1374 aa)    
Predicted Functional Partners:
TRIM8
Tripartite motif containing 8.
      
 0.762
TRIM44
Tripartite motif containing 44.
    
 
 0.696
GRIN2D
Glutamate ionotropic receptor NMDA type subunit 2D; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
      
 0.633
TRIM27
Tripartite motif containing 27.
      
 0.622
TRIM62
Tripartite motif containing 62.
      
 0.615
TRIM16
Uncharacterized protein.
    
 
 0.615
CLSTN3
Calsyntenin 3.
      
 0.591
CBX3
Chromobox 3.
    
 
 0.583
F1P6N7_CANLF
Chromo domain-containing protein.
    
 
 0.583
F1P737_CANLF
Uncharacterized protein.
    
 
 0.583
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.