STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABTB2Ankyrin repeat and BTB domain containing 2. (1188 aa)    
Predicted Functional Partners:
CKAP5
Cytoskeleton associated protein 5.
    
 
 0.492
RELL1
RELT like 1.
      
 0.476
ARHGEF15
Rho guanine nucleotide exchange factor 15.
      
 0.476
DEPDC7
DEP domain containing 7.
      
 0.465
ATP8B4
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.452
MRPL47
Mitochondrial ribosomal protein L47.
      
 0.450
ITFG1
Integrin alpha FG-GAP repeat containing 1.
      
 0.445
IFT46
Intraflagellar transport 46.
    
 
 0.438
RIC8B
RIC8 guanine nucleotide exchange factor B.
      
 0.434
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.418
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.