Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAD | BAK1 | ENSCAFP00000034035 | ENSCAFP00000001448 | BCL2 associated agonist of cell death. | BCL2 antagonist/killer 1. | 0.831 |
BAD | BCL2L1 | ENSCAFP00000034035 | ENSCAFP00000010478 | BCL2 associated agonist of cell death. | BCL2 like 1. | 0.998 |
BAD | BCL2L11 | ENSCAFP00000034035 | ENSCAFP00000046855 | BCL2 associated agonist of cell death. | BCL2 like 11. | 0.868 |
BAD | BID | ENSCAFP00000034035 | ENSCAFP00000052515 | BCL2 associated agonist of cell death. | BH3 interacting domain death agonist. | 0.864 |
BAD | CYCS | ENSCAFP00000034035 | ENSCAFP00000004225 | BCL2 associated agonist of cell death. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.415 |
BAD | TP53 | ENSCAFP00000034035 | ENSCAFP00000064590 | BCL2 associated agonist of cell death. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] | 0.446 |
BAK1 | BAD | ENSCAFP00000001448 | ENSCAFP00000034035 | BCL2 antagonist/killer 1. | BCL2 associated agonist of cell death. | 0.831 |
BAK1 | BBC3 | ENSCAFP00000001448 | ENSCAFP00000054385 | BCL2 antagonist/killer 1. | Uncharacterized protein. | 0.778 |
BAK1 | BCL2L1 | ENSCAFP00000001448 | ENSCAFP00000010478 | BCL2 antagonist/killer 1. | BCL2 like 1. | 0.996 |
BAK1 | BCL2L11 | ENSCAFP00000001448 | ENSCAFP00000046855 | BCL2 antagonist/killer 1. | BCL2 like 11. | 0.918 |
BAK1 | BECN1 | ENSCAFP00000001448 | ENSCAFP00000047143 | BCL2 antagonist/killer 1. | Beclin 1. | 0.625 |
BAK1 | BECN2 | ENSCAFP00000001448 | ENSCAFP00000023183 | BCL2 antagonist/killer 1. | Beclin 2. | 0.521 |
BAK1 | BID | ENSCAFP00000001448 | ENSCAFP00000052515 | BCL2 antagonist/killer 1. | BH3 interacting domain death agonist. | 0.990 |
BAK1 | CYCS | ENSCAFP00000001448 | ENSCAFP00000004225 | BCL2 antagonist/killer 1. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.947 |
BAK1 | PMAIP1 | ENSCAFP00000001448 | ENSCAFP00000032282 | BCL2 antagonist/killer 1. | Phorbol-12-myristate-13-acetate-induced protein 1; Promotes activation of caspases and apoptosis. Promotes mitochondrial membrane changes and efflux of apoptogenic proteins from the mitochondria. Contributes to p53/TP53-dependent apoptosis after radiation exposure. Promotes proteasomal degradation of MCL1. Competes with BAK1 and with BIM/BCL2L11 for binding to MCL1; can displace BAK1 and BIM/BCL2L11 from their binding sites (By similarity). Belongs to the PMAIP1 family. | 0.661 |
BAK1 | TP53 | ENSCAFP00000001448 | ENSCAFP00000064590 | BCL2 antagonist/killer 1. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] | 0.976 |
BBC3 | BAK1 | ENSCAFP00000054385 | ENSCAFP00000001448 | Uncharacterized protein. | BCL2 antagonist/killer 1. | 0.778 |
BBC3 | BCL2L1 | ENSCAFP00000054385 | ENSCAFP00000010478 | Uncharacterized protein. | BCL2 like 1. | 0.986 |
BBC3 | BCL2L11 | ENSCAFP00000054385 | ENSCAFP00000046855 | Uncharacterized protein. | BCL2 like 11. | 0.567 |
BBC3 | BID | ENSCAFP00000054385 | ENSCAFP00000052515 | Uncharacterized protein. | BH3 interacting domain death agonist. | 0.934 |
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