STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN2BUBX domain protein 2B. (342 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.985
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.963
VCPIP1
Valosin containing protein interacting protein 1.
   
 
 0.950
UBXN6
UBX domain protein 6.
    
 0.944
UBXN1
UBX domain protein 1.
   
 0.892
FAF1
Fas associated factor 1.
    
 0.891
LOC100684252
UBX domain-containing protein.
    
 0.891
UBXN7
UBX domain-containing protein 7.
   
 
 0.881
UBXN8
UBX domain protein 8.
    
 0.881
PPP1R11
Protein phosphatase 1 regulatory inhibitor subunit 11.
   
 
 0.859
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.