STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XKR7XK-related protein. (581 aa)    
Predicted Functional Partners:
PGBD5
PiggyBac transposable element derived 5.
      
 0.879
POFUT1
Protein O-fucosyltransferase 1.
   
  
 0.721
ZC3H3
Zinc finger CCCH-type containing 3.
   
  
 0.641
CCDC137
Coiled-coil domain containing 137.
      
 0.640
STMN2
Stathmin 2.
      
 0.640
PFKFB1
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1.
   
  
 0.636
CACNA1B
Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.
   
  
 0.576
VEGFD
Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family.
   
  
 0.567
ARFGAP3
ADP ribosylation factor GTPase activating protein 3.
      
 0.566
SLC25A10
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.522
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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