STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPRIN1Uncharacterized protein. (717 aa)    
Predicted Functional Partners:
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.988
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.933
USP10
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 
 0.914
UBAP2L
Ubiquitin associated protein 2 like.
   
 
 0.880
FXR1
FMR1 autosomal homolog 1.
   
 
 0.782
TIA1
TIA1 cytotoxic granule associated RNA binding protein.
   
 
 0.774
CSDE1
Cold shock domain containing E1.
   
 
 0.738
LSM14A
LSM14A mRNA processing body assembly factor.
   
 
 0.726
PRRC2C
Proline rich coiled-coil 2C.
   
 
 0.718
OGFOD1
2-oxoglutarate and iron dependent oxygenase domain containing 1.
   
  
 0.691
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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