STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C20H3orf14Chromosome 20 C3orf14 homolog. (128 aa)    
Predicted Functional Partners:
CEP89
Centrosomal protein 89.
    
 
 0.730
C1H18orf54
Chromosome 1 C18orf54 homolog.
      
 0.543
CCDC150
Coiled-coil domain containing 150.
      
 0.528
SCLT1
Sodium channel and clathrin linker 1.
      
 0.528
CEP83
Centrosomal protein 83.
      
 0.524
FBF1
Fas binding factor 1.
      
 0.524
RIBC2
RIB43A domain with coiled-coils 2.
    
 
 0.518
CCDC77
Coiled-coil domain containing 77.
      
 0.490
TTBK2
Tau tubulin kinase 2.
      
 0.475
LRRC45
Leucine rich repeat containing 45.
      
 0.474
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.