STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100685875Small integral membrane protein 15. (74 aa)    
Predicted Functional Partners:
LRRC42
Leucine rich repeat containing 42.
      
 0.847
TCEANC2
Transcription elongation factor A N-terminal and central domain containing 2.
      
 0.843
EXD2
Exonuclease 3'-5' domain containing 2.
      
 0.838
DCAF5
DDB1 and CUL4 associated factor 5.
      
 0.831
LDLRAD1
Low density lipoprotein receptor class A domain containing 1.
      
 0.812
RIC8B
RIC8 guanine nucleotide exchange factor B.
      
 0.777
TMEM59
Transmembrane protein 59.
      
 0.712
HSPB11
Heat shock protein family B (small) member 11.
      
 0.710
ARFGEF2
ADP ribosylation factor guanine nucleotide exchange factor 2.
      
 0.691
RBM39
RNA binding motif protein 39.
      
 0.689
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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