STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CWC27CWC27 spliceosome associated cyclophilin. (472 aa)    
Predicted Functional Partners:
CWC22
CWC22 spliceosome associated protein homolog.
   
 
 0.892
TPI1
Triosephosphate isomerase; Triosephosphate isomerase is an extremely efficient metabolic enzyme that catalyzes the interconversion between dihydroxyacetone phosphate (DHAP) and D-glyceraldehyde-3-phosphate (G3P) in glycolysis and gluconeogenesis.
 
 
 
 0.885
PRPF8
Pre-mRNA processing factor 8.
   
 
 0.884
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 
 0.870
FRA10AC1
FRA10A associated CGG repeat 1.
   
 
 0.867
CDC5L
Cell division cycle 5 like.
   
 
 0.845
DHX16
DEAH-box helicase 16.
   
 
 0.837
BUD13
BUD13 homolog.
    
 
 0.799
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.790
PRPF19
Pre-mRNA processing factor 19.
   
 
 0.790
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.