STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F1PRC4_CANLFIF rod domain-containing protein; Belongs to the intermediate filament family. (161 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 
 0.732
ENSCAFP00000047437
Uncharacterized protein.
   
 
 0.732
ENSCAFP00000053186
annotation not available
   
 
 0.732
BAG3
BCL2 associated athanogene 3.
    
 
 0.605
BAG1
BCL2 associated athanogene 1.
    
 
 0.495
PRKN
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.
    
 
 0.443
E2RHS7_CANLF
Josephin domain-containing protein.
    
 
 0.411
BAG2
BCL2 associated athanogene 2.
    
 
 0.401
ENSCAFP00000047998
Uncharacterized protein.
    
 
 0.401
HSPA4L
Heat shock protein family A (Hsp70) member 4 like.
    
 
 0.400
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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