STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN5Sad1 and UNC84 domain containing 5. (365 aa)    
Predicted Functional Partners:
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
 
 0.853
CETN1
Centrin 1.
   
 
 0.794
HOOK2
Hook microtubule tethering protein 2.
    
 
 0.698
PMFBP1
Polyamine modulated factor 1 binding protein 1.
    
 
 0.682
CNTLN
Centlein.
      
 0.679
PACRG
Parkin coregulated.
      
 0.678
ODF1
Outer dense fiber of sperm tails 1.
   
 
 0.672
SPATA6
Spermatogenesis associated 6.
      
 0.661
CFAP54
Cilia and flagella associated protein 54.
   
  
 0.646
RSPH6A
Radial spoke head 6 homolog A.
      
 0.642
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.