STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRG4Proline rich and Gla domain 4. (225 aa)    
Predicted Functional Partners:
QSER1
Glutamine and serine rich 1.
 
    
 0.772
SDR16C5
Short chain dehydrogenase/reductase family 16C member 5; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.680
NDFIP1
Nedd4 family interacting protein 1.
      
 0.637
CEP41
Centrosomal protein 41.
      
 0.626
TAF5
TATA-box binding protein associated factor 5.
      
 0.566
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.550
TCP11L1
T-complex 11 like 1.
   
  
 0.534
GATAD2B
GATA zinc finger domain containing 2B.
   
  
 0.533
TMEM74
Transmembrane protein 74.
      
 0.526
TAF2
TATA-box binding protein associated factor 2.
      
 0.523
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.