STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAT1FAT atypical cadherin 1. (4646 aa)    
Predicted Functional Partners:
RERE
Arginine-glutamic acid dipeptide repeats.
    
 0.782
FRMD6
FERM domain containing 6.
    
 0.714
SLC36A4
Solute carrier family 36 member 4.
      
 0.692
CSNK1D
Casein kinase 1 delta.
    
 0.663
CSNK1E
Casein kinase 1 epsilon; Belongs to the protein kinase superfamily.
    
 0.663
MTNR1B
Melatonin receptor 1B; Belongs to the G-protein coupled receptor 1 family.
      
 0.615
FASTKD3
FAST kinase domains 3.
   
  
 0.568
FFAR4
G protein-coupled receptor 120.
      
 0.557
LIX1
Limb and CNS expressed 1.
   
 0.554
LIX1L
Limb and CNS expressed 1 like.
   
 0.554
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.