STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEPDPeptidase D. (493 aa)    
Predicted Functional Partners:
PGD
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
  
 0.705
RIMKLB
Ribosomal modification protein rimK like family member B.
   
  
 0.688
ENSCAFP00000048006
Malate dehydrogenase.
  
  
 0.656
LOC478220
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 
 0.648
FH
Fumarate hydratase.
  
 
 0.621
ME2
Malic enzyme.
  
  
 0.618
ME3
Malic enzyme.
  
  
 0.605
DNPEP
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
  
 
 0.527
MASP2
Mannan binding lectin serine peptidase 2; Belongs to the peptidase S1 family.
    
 
 0.523
PGM1
Phosphoglucomutase 1; Belongs to the phosphohexose mutase family.
   
 
 0.513
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.