STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF143Zinc finger protein 143. (637 aa)    
Predicted Functional Partners:
THAP11
THAP domain containing 11.
    
 0.934
ZNF76
Zinc finger protein 76.
     
  0.881
SP1
Sp1 transcription factor.
    
 
0.824
POU2F1
POU domain protein.
    
 0.821
HCFC1
Host cell factor C1.
    
 0.787
HCFC2
Host cell factor C2.
    
 0.787
TBP
TATA-box binding protein.
   
 0.742
RAD21
RAD21 cohesin complex component.
   
 
 0.711
AK6
Uncharacterized protein.
   
 0.705
TAF11
TATA-box binding protein associated factor 11.
   
 0.636
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.