STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBR1Debranching RNA lariats 1. (544 aa)    
Predicted Functional Partners:
DHX38
DEAH-box helicase 38.
   
 
 0.749
LTN1
Listerin E3 ubiquitin protein ligase 1.
      
 0.677
XPO5
Exportin 5.
   
  
 0.653
DNM1
Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
      
 0.585
CWF19L1
CWF19 like 1, cell cycle control.
   
 
0.522
METTL9
Methyltransferase like 9.
 
 
    0.519
NEIL3
Nei like DNA glycosylase 3.
   
  
 0.516
UPF1
UPF1 RNA helicase and ATPase.
   
  
 0.515
GPATCH11
DUF4187 domain-containing protein.
   
 
 0.512
ENSCAFP00000051678
G-patch domain-containing protein.
   
 
 0.512
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.