RGS9BP protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RGS9BP

Regulator of G protein signaling 9 binding protein. (238 aa)

Predicted Functional Partners:

RGS7BP

0.866

ZBBX

0.852

GNB5

0.842

RGS11

0.777

ASXL3

0.700

CNGB3

0.698

AIPL1

0.698

DCP1B

0.626

LRIT3

0.624

OPN1LW

0.616

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIPL1	CNGB3	ENSCAFP00000022785	ENSCAFP00000013075	Aryl hydrocarbon receptor interacting protein like 1.	Cyclic nucleotide-gated cation channel beta-3; Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cGMP which leads to an opening of the cation channel and thereby causing a depolarization of rod photoreceptors. Induced a flickering channel gating, weakened the outward rectification in the presence of extracellular calcium, increased sensitivity for L-cis diltiazem and enhanced the cAMP efficacy of the channel when coexpressed with CNGA3. Essential for the generation of light-evoked electrical responses [...]	0.482
AIPL1	LRIT3	ENSCAFP00000022785	ENSCAFP00000016927	Aryl hydrocarbon receptor interacting protein like 1.	Leucine rich repeat, Ig-like and transmembrane domains 3.	0.460
AIPL1	OPN1LW	ENSCAFP00000022785	ENSCAFP00000028751	Aryl hydrocarbon receptor interacting protein like 1.	Long-wave-sensitive opsin 1; Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.	0.542
AIPL1	RGS9BP	ENSCAFP00000022785	ENSCAFP00000011151	Aryl hydrocarbon receptor interacting protein like 1.	Regulator of G protein signaling 9 binding protein.	0.698
ASXL3	RGS9BP	ENSCAFP00000026557	ENSCAFP00000011151	ASXL transcriptional regulator 3.	Regulator of G protein signaling 9 binding protein.	0.700
ASXL3	ZBBX	ENSCAFP00000026557	ENSCAFP00000060482	ASXL transcriptional regulator 3.	Zinc finger B-box domain containing.	0.830
CNGB3	AIPL1	ENSCAFP00000013075	ENSCAFP00000022785	Cyclic nucleotide-gated cation channel beta-3; Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cGMP which leads to an opening of the cation channel and thereby causing a depolarization of rod photoreceptors. Induced a flickering channel gating, weakened the outward rectification in the presence of extracellular calcium, increased sensitivity for L-cis diltiazem and enhanced the cAMP efficacy of the channel when coexpressed with CNGA3. Essential for the generation of light-evoked electrical responses [...]	Aryl hydrocarbon receptor interacting protein like 1.	0.482
CNGB3	GNB5	ENSCAFP00000013075	ENSCAFP00000023022	Cyclic nucleotide-gated cation channel beta-3; Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cGMP which leads to an opening of the cation channel and thereby causing a depolarization of rod photoreceptors. Induced a flickering channel gating, weakened the outward rectification in the presence of extracellular calcium, increased sensitivity for L-cis diltiazem and enhanced the cAMP efficacy of the channel when coexpressed with CNGA3. Essential for the generation of light-evoked electrical responses [...]	G protein subunit beta 5.	0.538
CNGB3	LRIT3	ENSCAFP00000013075	ENSCAFP00000016927	Cyclic nucleotide-gated cation channel beta-3; Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cGMP which leads to an opening of the cation channel and thereby causing a depolarization of rod photoreceptors. Induced a flickering channel gating, weakened the outward rectification in the presence of extracellular calcium, increased sensitivity for L-cis diltiazem and enhanced the cAMP efficacy of the channel when coexpressed with CNGA3. Essential for the generation of light-evoked electrical responses [...]	Leucine rich repeat, Ig-like and transmembrane domains 3.	0.527
CNGB3	OPN1LW	ENSCAFP00000013075	ENSCAFP00000028751	Cyclic nucleotide-gated cation channel beta-3; Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cGMP which leads to an opening of the cation channel and thereby causing a depolarization of rod photoreceptors. Induced a flickering channel gating, weakened the outward rectification in the presence of extracellular calcium, increased sensitivity for L-cis diltiazem and enhanced the cAMP efficacy of the channel when coexpressed with CNGA3. Essential for the generation of light-evoked electrical responses [...]	Long-wave-sensitive opsin 1; Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.	0.541
CNGB3	RGS11	ENSCAFP00000013075	ENSCAFP00000060980	Cyclic nucleotide-gated cation channel beta-3; Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cGMP which leads to an opening of the cation channel and thereby causing a depolarization of rod photoreceptors. Induced a flickering channel gating, weakened the outward rectification in the presence of extracellular calcium, increased sensitivity for L-cis diltiazem and enhanced the cAMP efficacy of the channel when coexpressed with CNGA3. Essential for the generation of light-evoked electrical responses [...]	Regulator of G protein signaling 11.	0.546
CNGB3	RGS7BP	ENSCAFP00000013075	ENSCAFP00000010809	Cyclic nucleotide-gated cation channel beta-3; Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cGMP which leads to an opening of the cation channel and thereby causing a depolarization of rod photoreceptors. Induced a flickering channel gating, weakened the outward rectification in the presence of extracellular calcium, increased sensitivity for L-cis diltiazem and enhanced the cAMP efficacy of the channel when coexpressed with CNGA3. Essential for the generation of light-evoked electrical responses [...]	Regulator of G protein signaling 7 binding protein.	0.623
CNGB3	RGS9BP	ENSCAFP00000013075	ENSCAFP00000011151	Cyclic nucleotide-gated cation channel beta-3; Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cGMP which leads to an opening of the cation channel and thereby causing a depolarization of rod photoreceptors. Induced a flickering channel gating, weakened the outward rectification in the presence of extracellular calcium, increased sensitivity for L-cis diltiazem and enhanced the cAMP efficacy of the channel when coexpressed with CNGA3. Essential for the generation of light-evoked electrical responses [...]	Regulator of G protein signaling 9 binding protein.	0.698
DCP1B	GNB5	ENSCAFP00000051137	ENSCAFP00000023022	Decapping mRNA 1B.	G protein subunit beta 5.	0.517
DCP1B	LRIT3	ENSCAFP00000051137	ENSCAFP00000016927	Decapping mRNA 1B.	Leucine rich repeat, Ig-like and transmembrane domains 3.	0.638
DCP1B	OPN1LW	ENSCAFP00000051137	ENSCAFP00000028751	Decapping mRNA 1B.	Long-wave-sensitive opsin 1; Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.	0.415
DCP1B	RGS11	ENSCAFP00000051137	ENSCAFP00000060980	Decapping mRNA 1B.	Regulator of G protein signaling 11.	0.544
DCP1B	RGS7BP	ENSCAFP00000051137	ENSCAFP00000010809	Decapping mRNA 1B.	Regulator of G protein signaling 7 binding protein.	0.545
DCP1B	RGS9BP	ENSCAFP00000051137	ENSCAFP00000011151	Decapping mRNA 1B.	Regulator of G protein signaling 9 binding protein.	0.626
GNB5	CNGB3	ENSCAFP00000023022	ENSCAFP00000013075	G protein subunit beta 5.	Cyclic nucleotide-gated cation channel beta-3; Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cGMP which leads to an opening of the cation channel and thereby causing a depolarization of rod photoreceptors. Induced a flickering channel gating, weakened the outward rectification in the presence of extracellular calcium, increased sensitivity for L-cis diltiazem and enhanced the cAMP efficacy of the channel when coexpressed with CNGA3. Essential for the generation of light-evoked electrical responses [...]	0.538