STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC475957Uncharacterized protein. (1783 aa)    
Predicted Functional Partners:
CCDC73
Coiled-coil domain containing 73.
      
 0.743
IRX6
Iroquois homeobox 6.
      
 0.541
ASIC4
Acid sensing ion channel subunit family member 4; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.471
RTL4
Retrotransposon Gag like 4.
      
 0.471
GHRHR
Growth hormone releasing hormone receptor; Belongs to the G-protein coupled receptor 2 family.
      
 0.457
PAPPA2
Pappalysin 2.
      
 0.439
DPP10
Dipeptidyl peptidase like 10; Belongs to the peptidase S9B family.
      
 0.403
ELP4
Elongator acetyltransferase complex subunit 4.
      
 0.403
TSHB
Thyrotropin subunit beta; Indispensable for the control of thyroid structure and metabolism.
      
 0.400
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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