STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1052 aa)    
Predicted Functional Partners:
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
 0.986
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
 
 0.978
RSF1
Remodeling and spacing factor 1.
   
 0.974
POLE3
DNA polymerase epsilon 3, accessory subunit.
   
 
 0.965
CHRAC1
Chromatin accessibility complex subunit 1.
    
 
 0.935
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.918
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 
 0.882
ENSCAFP00000058271
WD_REPEATS_REGION domain-containing protein.
   
 0.871
DDX21
DExD-box helicase 21.
   
 0.857
MYBBP1A
MYB binding protein 1a.
   
 0.847
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.