TMEM150A protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

TMEM150A

Transmembrane protein 150A. (271 aa)

Predicted Functional Partners:

HSPH1

0.696

SH3BGRL

0.692

RPS6KA6

0.690

FRMD4A

0.682

BGLAP

0.548

KLK8

0.536

OXR1

0.534

ACOX3

0.499

PI4KA

0.490

NECTIN3

0.479

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACOX3	TMEM150A	ENSCAFP00000021458	ENSCAFP00000011391	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Transmembrane protein 150A.	0.499
BGLAP	TMEM150A	ENSCAFP00000056074	ENSCAFP00000011391	Osteocalcin; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Transmembrane protein 150A.	0.548
FRMD4A	HSPH1	ENSCAFP00000045869	ENSCAFP00000053951	FERM domain containing 4A.	Heat shock protein family H (Hsp110) member 1.	0.555
FRMD4A	RPS6KA6	ENSCAFP00000045869	ENSCAFP00000025598	FERM domain containing 4A.	Ribosomal protein S6 kinase.	0.474
FRMD4A	SH3BGRL	ENSCAFP00000045869	ENSCAFP00000034030	FERM domain containing 4A.	SH3 domain binding glutamate rich protein like.	0.518
FRMD4A	TMEM150A	ENSCAFP00000045869	ENSCAFP00000011391	FERM domain containing 4A.	Transmembrane protein 150A.	0.682
HSPH1	FRMD4A	ENSCAFP00000053951	ENSCAFP00000045869	Heat shock protein family H (Hsp110) member 1.	FERM domain containing 4A.	0.555
HSPH1	KLK8	ENSCAFP00000053951	ENSCAFP00000033474	Heat shock protein family H (Hsp110) member 1.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.445
HSPH1	OXR1	ENSCAFP00000053951	ENSCAFP00000064061	Heat shock protein family H (Hsp110) member 1.	Oxidation resistance 1.	0.421
HSPH1	RPS6KA6	ENSCAFP00000053951	ENSCAFP00000025598	Heat shock protein family H (Hsp110) member 1.	Ribosomal protein S6 kinase.	0.546
HSPH1	SH3BGRL	ENSCAFP00000053951	ENSCAFP00000034030	Heat shock protein family H (Hsp110) member 1.	SH3 domain binding glutamate rich protein like.	0.615
HSPH1	TMEM150A	ENSCAFP00000053951	ENSCAFP00000011391	Heat shock protein family H (Hsp110) member 1.	Transmembrane protein 150A.	0.696
KLK8	HSPH1	ENSCAFP00000033474	ENSCAFP00000053951	Uncharacterized protein; Belongs to the peptidase S1 family.	Heat shock protein family H (Hsp110) member 1.	0.445
KLK8	TMEM150A	ENSCAFP00000033474	ENSCAFP00000011391	Uncharacterized protein; Belongs to the peptidase S1 family.	Transmembrane protein 150A.	0.536
NECTIN3	TMEM150A	ENSCAFP00000015207	ENSCAFP00000011391	Nectin cell adhesion molecule 3.	Transmembrane protein 150A.	0.479
OXR1	HSPH1	ENSCAFP00000064061	ENSCAFP00000053951	Oxidation resistance 1.	Heat shock protein family H (Hsp110) member 1.	0.421
OXR1	TMEM150A	ENSCAFP00000064061	ENSCAFP00000011391	Oxidation resistance 1.	Transmembrane protein 150A.	0.534
PI4KA	TMEM150A	ENSCAFP00000022499	ENSCAFP00000011391	Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.	Transmembrane protein 150A.	0.490
RPS6KA6	FRMD4A	ENSCAFP00000025598	ENSCAFP00000045869	Ribosomal protein S6 kinase.	FERM domain containing 4A.	0.474
RPS6KA6	HSPH1	ENSCAFP00000025598	ENSCAFP00000053951	Ribosomal protein S6 kinase.	Heat shock protein family H (Hsp110) member 1.	0.546