GALNT18 protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GALNT18

Polypeptide N-acetylgalactosaminyltransferase. (655 aa)

Predicted Functional Partners:

GCNT3

0.923

B3GNT3

0.922

ST6GALNAC1

0.912

C1GALT1

0.905

C1GALT1C1

0.845

TNRC18

0.698

OSBPL6

0.692

DNPEP

0.687

NCAPH2

0.614

ANAPC11

0.600

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANAPC11	GALNT18	ENSCAFP00000008791	ENSCAFP00000011411	Anaphase promoting complex subunit 11.	Polypeptide N-acetylgalactosaminyltransferase.	0.600
B3GNT3	C1GALT1	ENSCAFP00000022393	ENSCAFP00000003244	Hexosyltransferase.	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	0.949
B3GNT3	C1GALT1C1	ENSCAFP00000022393	ENSCAFP00000027374	Hexosyltransferase.	C1GALT1 specific chaperone 1.	0.938
B3GNT3	GALNT18	ENSCAFP00000022393	ENSCAFP00000011411	Hexosyltransferase.	Polypeptide N-acetylgalactosaminyltransferase.	0.922
B3GNT3	GCNT3	ENSCAFP00000022393	ENSCAFP00000024503	Hexosyltransferase.	Glucosaminyl (N-acetyl) transferase 3, mucin type.	0.953
B3GNT3	ST6GALNAC1	ENSCAFP00000022393	ENSCAFP00000049193	Hexosyltransferase.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.882
C1GALT1	B3GNT3	ENSCAFP00000003244	ENSCAFP00000022393	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	Hexosyltransferase.	0.949
C1GALT1	C1GALT1C1	ENSCAFP00000003244	ENSCAFP00000027374	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	C1GALT1 specific chaperone 1.	0.997
C1GALT1	GALNT18	ENSCAFP00000003244	ENSCAFP00000011411	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	Polypeptide N-acetylgalactosaminyltransferase.	0.905
C1GALT1	GCNT3	ENSCAFP00000003244	ENSCAFP00000024503	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	Glucosaminyl (N-acetyl) transferase 3, mucin type.	0.971
C1GALT1	ST6GALNAC1	ENSCAFP00000003244	ENSCAFP00000049193	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.945
C1GALT1C1	B3GNT3	ENSCAFP00000027374	ENSCAFP00000022393	C1GALT1 specific chaperone 1.	Hexosyltransferase.	0.938
C1GALT1C1	C1GALT1	ENSCAFP00000027374	ENSCAFP00000003244	C1GALT1 specific chaperone 1.	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.	0.997
C1GALT1C1	GALNT18	ENSCAFP00000027374	ENSCAFP00000011411	C1GALT1 specific chaperone 1.	Polypeptide N-acetylgalactosaminyltransferase.	0.845
C1GALT1C1	GCNT3	ENSCAFP00000027374	ENSCAFP00000024503	C1GALT1 specific chaperone 1.	Glucosaminyl (N-acetyl) transferase 3, mucin type.	0.929
C1GALT1C1	ST6GALNAC1	ENSCAFP00000027374	ENSCAFP00000049193	C1GALT1 specific chaperone 1.	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.	0.941
DNPEP	GALNT18	ENSCAFP00000022691	ENSCAFP00000011411	Aspartyl aminopeptidase; Belongs to the peptidase M18 family.	Polypeptide N-acetylgalactosaminyltransferase.	0.687
DNPEP	NCAPH2	ENSCAFP00000022691	ENSCAFP00000045298	Aspartyl aminopeptidase; Belongs to the peptidase M18 family.	Non-SMC condensin II complex subunit H2.	0.645
DNPEP	OSBPL6	ENSCAFP00000022691	ENSCAFP00000043723	Aspartyl aminopeptidase; Belongs to the peptidase M18 family.	Oxysterol-binding protein; Belongs to the OSBP family.	0.699
DNPEP	TNRC18	ENSCAFP00000022691	ENSCAFP00000038377	Aspartyl aminopeptidase; Belongs to the peptidase M18 family.	Trinucleotide repeat containing 18.	0.708