STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF7Ring finger protein 7. (90 aa)    
Predicted Functional Partners:
ELOB
Elongin B.
   
 0.998
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.997
ELOC
Elongin C; Belongs to the SKP1 family.
   
 0.994
UBE2F
Ubiquitin conjugating enzyme E2 F (putative); Belongs to the ubiquitin-conjugating enzyme family.
   
 0.980
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.970
ENSCAFP00000054409
Skp1_POZ domain-containing protein.
   
 0.969
CUL2
Cullin 2; Belongs to the cullin family.
   
 0.938
NEDD8
NEDD8 ubiquitin like modifier.
   
 0.937
UBE2D1
Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.935
APOBEC3Z3
CMP/dCMP-type deaminase domain-containing protein.
   
 0.903
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.