STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CGGBP1CGG triplet repeat binding protein 1. (167 aa)    
Predicted Functional Partners:
MRM1
Mitochondrial rRNA methyltransferase 1.
    
   0.806
FMR1
Fragile X mental retardation 1.
   
 
 0.687
GIN1
Gypsy retrotransposon integrase 1.
    
 0.682
SPIN1
Spindlin 1.
    
   0.593
J9P2V8_CANLF
Uncharacterized protein.
    
   0.593
ENSCAFP00000064551
Uncharacterized protein.
    
   0.593
APEX1
DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.
    
   0.572
URB1
URB1 ribosome biogenesis 1 homolog.
      
 0.565
DDB1
Damage specific DNA binding protein 1.
    
   0.539
CLN8
Protein CLN8; Could play a role in cell proliferation during neuronal differentiation and in protection against cell death.
    
 
 0.511
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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