STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGGBP1CGG triplet repeat binding protein 1. (167 aa)    
Predicted Functional Partners:
URB1
URB1 ribosome biogenesis 1 homolog.
      
 0.679
CLN8
Protein CLN8; Could play a role in cell proliferation during neuronal differentiation and in protection against cell death.
    
 
 0.616
TIAL1
TIA1 cytotoxic granule associated RNA binding protein like 1.
   
 
 0.600
TCERG1
Transcription elongation regulator 1.
   
  
 0.567
FMR1
Fragile X mental retardation 1.
   
 
 0.530
THAP12
THAP domain containing 12.
   
 
 0.515
COR52H8
THAP-type domain-containing protein.
    
 
 0.509
ENSCAFP00000051044
THAP-type domain-containing protein.
    
 
 0.509
RAPGEF1
Rap guanine nucleotide exchange factor 1.
    
 
 0.500
SP3
Sp3 transcription factor.
   
 
 0.463
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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