STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC62Coiled-coil domain containing 62. (662 aa)    
Predicted Functional Partners:
HIP1R
Huntingtin interacting protein 1 related.
 
    
 0.876
SPATA16
Spermatogenesis associated 16.
      
 0.775
SPACA1
Sperm acrosome associated 1.
      
 0.760
DPY19L2
Dpy-19 like 2.
      
 0.742
GGN
Gametogenetin.
      
 0.683
MCCC1
Methylcrotonoyl-CoA carboxylase 1.
      
 0.676
PICK1
Protein interacting with PRKCA 1.
      
 0.671
DENR
Density-regulated protein; Belongs to the DENR family.
 
 
  
 0.664
ARRDC5
Arrestin domain containing 5.
      
 0.659
ACMSD
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). Belongs to the metallo-dependent hydrolases superfamily.
      
 0.622
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.