STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAP30Sin3A associated protein 30. (220 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
    
 0.992
PTPN9
SIN3 transcription regulator family member A.
    
 0.983
HDAC1
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.981
HDAC2
Histone deacetylase 2.
    
 0.981
ARID4A
AT-rich interaction domain 4A.
   
 0.973
SAP30L
SAP30 like.
  
 
 
0.971
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
   
 
 0.970
SIN3B
SIN3 transcription regulator family member B.
    
 0.960
ING2
Inhibitor of growth protein.
    
 
 0.955
BRMS1L
BRMS1 like transcriptional repressor.
   
 
 0.954
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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