STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCRG1Stimulator of chondrogenesis 1. (98 aa)    
Predicted Functional Partners:
BANF2
Barrier to autointegration factor 2.
      
 0.591
HOXC4
Homeobox C4.
      
 0.532
FAM229B
Family with sequence similarity 229 member B.
      
 0.529
EFEMP1
EGF containing fibulin extracellular matrix protein 1.
   
  
 0.527
CNTNAP2
Contactin associated protein like 2.
   
  
 0.525
NGFR
Nerve growth factor receptor.
      
 0.518
CEP44
Centrosomal protein 44.
      
 0.514
AQP1
Aquaporin-1; Forms a water-specific channel that provides the plasma membranes of red cells and kidney proximal tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient.
   
  
 0.487
TBC1D30
TBC1 domain family member 30.
   
  
 0.480
VTN
SMB domain-containing protein.
      
 0.474
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.