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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA9Spermatogenesis associated 9. (253 aa)    
Predicted Functional Partners:
KIF24
Kinesin family member 24; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.803
UBAP1
Uncharacterized protein.
      
 0.789
RNF123
Ring finger protein 123.
      
 0.788
ASB6
Ankyrin repeat and SOCS box containing 6.
      
 0.779
THAP3
THAP domain containing 3.
      
 0.707
BLZF1
Basic leucine zipper nuclear factor 1.
      
 0.707
FLI1
Fli-1 proto-oncogene, ETS transcription factor.
      
 0.674
DKKL1
Dickkopf like acrosomal protein 1.
      
 0.636
CABYR
Calcium binding tyrosine phosphorylation regulated.
      
 0.635
TSPAN9
Tetraspanin.
      
 0.574
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.