STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA9Spermatogenesis associated 9. (253 aa)    
Predicted Functional Partners:
ZMAT5
Zinc finger matrin-type 5.
      
 0.701
SPATA16
Spermatogenesis associated 16.
      
 0.692
KIF24
Kinesin family member 24; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.690
ASB6
Ankyrin repeat and SOCS box containing 6.
      
 0.674
RNF123
Ring finger protein 123.
      
 0.671
UBAP1
Uncharacterized protein.
      
 0.656
FCAMR
Fc fragment of IgA and IgM receptor.
      
 0.629
ILDR2
Immunoglobulin like domain containing receptor 2.
      
 0.621
REEP2
Receptor expression-enhancing protein.
      
 0.597
CHMP4C
Charged multivesicular body protein 4C.
      
 0.597
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.