STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPC4APTransient receptor potential cation channel subfamily C member 4 associated protein. (797 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
   
 
 0.812
CUL4A
Cullin 4A; Belongs to the cullin family.
   
 
 0.789
DCAF4
DDB1 and CUL4 associated factor 4.
   
  
 0.781
DCAF5
DDB1 and CUL4 associated factor 5.
      
 0.769
DCAF6
DDB1 and CUL4 associated factor 6.
    
 
 0.688
EDEM2
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
 
 
  
 0.678
MTRF1L
Mitochondrial translational release factor 1 like.
      
 0.621
TBC1D22A
TBC1 domain family member 22A.
   
  
 0.571
RANBP3
RAN binding protein 3.
   
  
 0.547
NHLRC2
NHL repeat containing 2.
   
 
 0.547
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.