STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MAP1BMicrotubule associated protein 1B. (2576 aa)    
Predicted Functional Partners:
MAP1S
Microtubule associated protein 1S.
    
  0.919
MAP1A
Microtubule associated protein 1A.
   
 0.911
MAPT
Microtubule-associated protein.
   
 
 0.884
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.848
BECN1
Beclin 1.
      
 0.801
LRRK2
Leucine rich repeat kinase 2.
    
 
 0.789
RASSF1
Ras association domain family member 1.
    
 
 0.781
ATG12
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 
 0.751
PHF1
PHD finger protein 1.
      
 0.738
MAP1LC3B
Uncharacterized protein.
    
 
 0.732
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.