STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TIGD4Tigger transposable element derived 4. (511 aa)    
Predicted Functional Partners:
LIN37
Lin-37 DREAM MuvB core complex component.
      
 0.861
MCM3AP
Minichromosome maintenance complex component 3 associated protein.
      
 0.861
TIGD5
Tigger transposable element derived 5.
      
 0.694
ARFIP1
ADP ribosylation factor interacting protein 1.
      
 0.692
SOCS7
Suppressor of cytokine signaling 7.
      
 0.687
AMOTL1
Angiomotin like 1.
      
 0.678
NOP56
NOP56 ribonucleoprotein.
      
 0.600
NOP58
NOP58 ribonucleoprotein.
      
 0.591
TANGO2
Transport and golgi organization 2 homolog.
      
 0.591
JCHAIN
Joining chain of multimeric IgA and IgM.
      
 0.569
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.