STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP4La ribonucleoprotein domain family member 4. (721 aa)    
Predicted Functional Partners:
PIP4K2C
Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma.
      
 0.811
RACK1
Receptor for activated C kinase 1.
    
 
 0.783
ENSCAFP00000062285
WD_REPEATS_REGION domain-containing protein.
    
 
 0.783
FLNA
Filamin A.
    
   0.769
PPIL4
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
    
 
 0.741
POLD2
DNA polymerase delta 2, accessory subunit.
   
  
 0.699
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.695
BUD13
BUD13 homolog.
      
 0.690
LARP4B
La ribonucleoprotein domain family member 4B.
   
 
 0.677
ATXN2
Ataxin 2.
   
 
 0.645
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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