STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPNE1RNA binding motif protein 12. (923 aa)    
Predicted Functional Partners:
PWWP2B
PWWP domain-containing protein.
      
 0.856
ASB12
Ankyrin repeat and SOCS box containing 12.
    
 0.838
PPEF1
Serine/threonine-protein phosphatase with EF-hands.
      
 0.827
ARHGEF25
Rho guanine nucleotide exchange factor 25.
      
 0.814
LIPM
AB hydrolase-1 domain-containing protein.
      
 0.811
RLIM
Ring finger protein, LIM domain interacting.
      
 0.772
ATP8B2
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
  
 0.753
ADAM8
ADAM metallopeptidase domain 8.
      
 0.691
GSPT1
G1 to S phase transition 1.
    
 
 0.650
GSPT2
G1 to S phase transition 2.
    
 
 0.650
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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