STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM169AFamily with sequence similarity 169 member A. (670 aa)    
Predicted Functional Partners:
SEC22C
SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family.
    
 
 0.664
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.549
RHOF
Ras homolog family member F, filopodia associated.
   
  0.542
ZNF521
Zinc finger protein 521.
    
 
 0.529
LRSAM1
Leucine rich repeat and sterile alpha motif containing 1.
    
 
 0.527
CLPTM1L
CLPTM1 like.
    
 
 0.526
LMNB1
Lamin B1; Belongs to the intermediate filament family.
   
 0.501
USO1
USO1 vesicle transport factor.
   
 
 0.490
SLC4A7
Anion exchange protein.
    
 0.489
WDR31
WD repeat domain 31.
   
 
 0.488
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.