STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM4SF1Transmembrane 4 L six family member 1. (117 aa)    
Predicted Functional Partners:
CRIP2
Cysteine rich protein 2.
   
  
 0.708
CRELD2
Cysteine rich with EGF like domains 2.
      
 0.624
EMP1
Epithelial membrane protein 1.
   
  
 0.602
SPACA1
Sperm acrosome associated 1.
      
 0.579
GFRA1
GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family.
   
  
 0.579
S100A5
Protein S100-A4.
  
  
 0.566
LRRIQ1
Leucine rich repeats and IQ motif containing 1.
      
 0.565
SYCE1
Synaptonemal complex central element protein 1.
      
 0.561
TSPAN1
Tetraspanin.
      
 0.539
STRA8
Stimulated by retinoic acid 8.
      
 0.527
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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