STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF13Ring finger protein 13. (381 aa)    
Predicted Functional Partners:
TMEM183A
Transmembrane protein 183A.
      
 0.831
HSF2BP
Heat shock transcription factor 2 binding protein.
      
 0.829
AP3S1
Adaptor related protein complex 3 subunit sigma 1.
    
 
 0.701
AP3D1
Adaptor related protein complex 3 subunit delta 1.
    
   0.654
SDF2
Stromal cell derived factor 2.
 
 
    0.621
CD63
Tetraspanin.
   
 
 0.608
KTI12
KTI12 chromatin associated homolog.
      
 0.597
PPP4R1
Protein phosphatase 4 regulatory subunit 1.
   
  
 0.597
FBLL1
Fibrillarin like 1.
      
 0.592
RPL10L
Ribosomal protein L10 like.
      
 0.591
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.