STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF13Ring finger protein 13. (381 aa)    
Predicted Functional Partners:
HSF2BP
Heat shock transcription factor 2 binding protein.
   
  
 0.858
TMEM183A
Transmembrane protein 183A.
      
 0.797
SDF2
Stromal cell derived factor 2.
 
 
    0.621
KTI12
KTI12 chromatin associated homolog.
      
 0.567
FBLL1
Fibrillarin like 1.
      
 0.560
CGRRF1
Cell growth regulator with ring finger domain 1.
   
 
 0.559
TTC26
Tetratricopeptide repeat domain 26.
      
 0.545
SDF2L1
Stromal cell derived factor 2 like 1.
 
 
    0.538
RNF170
Ring finger protein 170.
   
  
 0.533
RNFT1
Ring finger protein, transmembrane 1.
   
  
 0.526
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.