F1P8F9_CANLF protein (Canis lupus familiaris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

F1P8F9_CANLF

Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (68 aa)

Predicted Functional Partners:

SLC25A37

0.838

FXN

0.656

ABCB10

0.560

ABCB8

0.422

MTCH1

0.401

SLC25A33

0.401

SLC25A36

0.401

MRS2

0.400

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCB10	F1P8F9_CANLF	ENSCAFP00000017880	ENSCAFP00000012419	ATP binding cassette subfamily B member 10.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.560
ABCB10	FXN	ENSCAFP00000017880	ENSCAFP00000036075	ATP binding cassette subfamily B member 10.	Frataxin.	0.471
ABCB10	SLC25A37	ENSCAFP00000017880	ENSCAFP00000013422	ATP binding cassette subfamily B member 10.	Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.758
ABCB8	F1P8F9_CANLF	ENSCAFP00000007003	ENSCAFP00000012419	ATP binding cassette subfamily B member 8.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.422
ABCB8	SLC25A37	ENSCAFP00000007003	ENSCAFP00000013422	ATP binding cassette subfamily B member 8.	Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.477
F1P8F9_CANLF	ABCB10	ENSCAFP00000012419	ENSCAFP00000017880	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ATP binding cassette subfamily B member 10.	0.560
F1P8F9_CANLF	ABCB8	ENSCAFP00000012419	ENSCAFP00000007003	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ATP binding cassette subfamily B member 8.	0.422
F1P8F9_CANLF	FXN	ENSCAFP00000012419	ENSCAFP00000036075	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Frataxin.	0.656
F1P8F9_CANLF	MRS2	ENSCAFP00000012419	ENSCAFP00000043347	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Magnesium transporter.	0.400
F1P8F9_CANLF	MTCH1	ENSCAFP00000012419	ENSCAFP00000031803	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Mitochondrial carrier 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.401
F1P8F9_CANLF	SLC25A33	ENSCAFP00000012419	ENSCAFP00000033509	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.401
F1P8F9_CANLF	SLC25A36	ENSCAFP00000012419	ENSCAFP00000041637	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Solute carrier family 25 member 36; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.401
F1P8F9_CANLF	SLC25A37	ENSCAFP00000012419	ENSCAFP00000013422	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.838
FXN	ABCB10	ENSCAFP00000036075	ENSCAFP00000017880	Frataxin.	ATP binding cassette subfamily B member 10.	0.471
FXN	F1P8F9_CANLF	ENSCAFP00000036075	ENSCAFP00000012419	Frataxin.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.656
FXN	SLC25A37	ENSCAFP00000036075	ENSCAFP00000013422	Frataxin.	Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.656
MRS2	F1P8F9_CANLF	ENSCAFP00000043347	ENSCAFP00000012419	Magnesium transporter.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.400
MRS2	SLC25A37	ENSCAFP00000043347	ENSCAFP00000013422	Magnesium transporter.	Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.400
MTCH1	F1P8F9_CANLF	ENSCAFP00000031803	ENSCAFP00000012419	Mitochondrial carrier 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.401
SLC25A33	F1P8F9_CANLF	ENSCAFP00000033509	ENSCAFP00000012419	Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.401