STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC142Coiled-coil domain containing 142. (749 aa)    
Predicted Functional Partners:
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.731
FBXW11
F-box and WD repeat domain containing 11.
    
 
 0.669
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 
 0.620
PPP2R3C
Protein phosphatase 2 regulatory subunit B''gamma.
     
 0.609
PPP2R2A
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.595
PPP2R2B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.595
ADIPOQ
Eukaryotic translation initiation factor 4A2; Belongs to the DEAD box helicase family.
   
 
 0.577
EIF4A1
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.577
ENSCAFP00000054804
Uncharacterized protein.
   
 
 0.577
ENSCAFP00000055070
Uncharacterized protein.
   
 
 0.577
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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