STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCTN1Tectonic family member 1. (411 aa)    
Predicted Functional Partners:
ENSCAFP00000065365
DUF1619 domain-containing protein.
 
      0.899
CC2D2A
Coiled-coil and C2 domain containing 2A.
    
 
 0.763
B9D1
B9 domain containing 1.
    
 
 0.762
TMEM231
Transmembrane protein 231.
    
 
 0.755
CC2D2B
Coiled-coil and C2 domain containing 2B.
    
 
 0.713
SNRNP48
Small nuclear ribonucleoprotein U11/U12 subunit 48.
      
 0.610
VEZT
Vezatin, adherens junctions transmembrane protein.
      
 0.607
SEMA3D
Semaphorin 3D; Belongs to the semaphorin family.
      
 0.603
SEMA3F
Semaphorin 3F; Belongs to the semaphorin family.
      
 0.592
SEMA6A
Semaphorin 6A; Belongs to the semaphorin family.
      
 0.592
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.