STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHMP4CCharged multivesicular body protein 4C. (236 aa)    
Predicted Functional Partners:
CHMP2A
Charged multivesicular body protein 2A.
   
 0.998
CHMP2B
Charged multivesicular body protein 2B.
   
 0.996
CHMP7
Charged multivesicular body protein 7.
    
 0.996
CHMP3
Uncharacterized protein.
   
 0.995
CHMP1A
Charged multivesicular body protein 1A.
   
 0.995
CHMP4A
Charged multivesicular body protein 4A.
  
 
0.991
CHMP4B
Charged multivesicular body protein 4B.
  
  
 
0.987
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.981
PDCD6IP
Programmed cell death 6 interacting protein.
   
 0.977
VPS4A
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.966
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.