STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABPAGA binding protein transcription factor subunit alpha. (461 aa)    
Predicted Functional Partners:
GABPB1
GA binding protein transcription factor subunit beta 1.
   
 
 0.937
GABPB2
GA binding protein transcription factor subunit beta 2.
   
 
 0.747
ERG
ETS transcription factor ERG.
 
    
 0.688
METTL23
Uncharacterized protein.
      
 0.687
LCOR
Ligand dependent nuclear receptor corepressor.
    
 
 0.653
ZNF213
Zinc finger protein 213.
    
 
 0.643
ATP5J
Uncharacterized protein.
   
  
 0.631
ATP5PF
ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family.
      
 0.629
PATZ1
POZ/BTB and AT hook containing zinc finger 1.
    
 
 0.568
ZNF148
Zinc finger protein 148.
   
 
 0.535
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (12%) [HD]