STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR54WD repeat domain 54. (334 aa)    
Predicted Functional Partners:
OSCP1
Organic solute carrier partner 1.
   
   0.840
CD99L2
CD99 molecule like 2.
      
 0.594
TMEM104
Transmembrane protein 104.
      
 0.570
NAT9
N-acetyltransferase 9 (putative).
      
 0.522
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
      
 0.476
FAAP100
FA core complex associated protein 100.
      
 0.445
WDR83
WD repeat domain 83.
      
 0.430
MRPL53
Mitochondrial ribosomal protein L53.
      
 0.428
DBN1
Drebrin 1.
      
 0.420
ZZEF1
Zinc finger ZZ-type and EF-hand domain containing 1.
   
  
 0.413
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.