STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN2Ataxin 2. (1144 aa)    
Predicted Functional Partners:
ATXN2L
Ataxin 2 like.
   
 0.973
LSM12
LSM12 homolog.
    
 0.956
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
    
 
 0.953
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.950
E2RHS7_CANLF
Josephin domain-containing protein.
     
 0.942
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
     
 0.911
NUFIP2
Nuclear FMR1 interacting protein 2.
   
 
 0.884
FAM98A
Family with sequence similarity 98 member A.
    
 
 0.847
ATXN1
Ataxin 1.
   
 
 0.846
TIA1
TIA1 cytotoxic granule associated RNA binding protein.
   
 
 0.832
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.