STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCP1ADecapping mRNA 1A. (699 aa)    
Predicted Functional Partners:
DCP2
Decapping mRNA 2.
    
 
 0.982
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 
 0.981
EDC3
Enhancer of mRNA decapping 3.
   
 
 0.981
EDC4
Enhancer of mRNA decapping 4.
    
 
 0.981
XRN1
5'-3' exoribonuclease 1.
   
 
 0.969
BAG4
BCL2 associated athanogene 4.
    
   0.926
PIM1
Protein kinase domain-containing protein.
    
   0.926
UPF1
UPF1 RNA helicase and ATPase.
    
 
 0.921
TIA1
TIA1 cytotoxic granule associated RNA binding protein.
   
 
 0.858
LOC100684639
Uncharacterized protein.
    
 
 0.854
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.