STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCP1ADecapping mRNA 1A. (699 aa)    
Predicted Functional Partners:
DCP2
Decapping mRNA 2.
    
 0.999
XRN1
5'-3' exoribonuclease 1.
   
 0.996
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 0.992
EDC4
Enhancer of mRNA decapping 4.
   
 0.992
EDC3
Enhancer of mRNA decapping 3.
   
 0.988
UPF1
UPF1 RNA helicase and ATPase.
   
 0.892
NAXE
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
   
 
 0.882
TIA1
TIA1 cytotoxic granule associated RNA binding protein.
   
 
 0.881
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
   
 0.880
LOC100684639
Uncharacterized protein.
    
 0.861
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.