LOC106557476 protein (Canis lupus familiaris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC106557476

Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)

Predicted Functional Partners:

TUBB1

0.887

TCF25

0.873

ENSCAFP00000048111

0.856

TUBB4A

0.847

TUBB6

0.760

TUBB

0.713

J9NUU1_CANLF

0.711

TUBB2B

0.709

MAPT

0.698

TUBB4B

0.690

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAFP00000048111	J9NUU1_CANLF	ENSCAFP00000048111	ENSCAFP00000036931	Uncharacterized protein; Belongs to the tubulin family.	Tubulin domain-containing protein.	0.701
ENSCAFP00000048111	LOC106557476	ENSCAFP00000048111	ENSCAFP00000012688	Uncharacterized protein; Belongs to the tubulin family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.856
ENSCAFP00000048111	MAPT	ENSCAFP00000048111	ENSCAFP00000046670	Uncharacterized protein; Belongs to the tubulin family.	Microtubule-associated protein.	0.829
ENSCAFP00000048111	TCF25	ENSCAFP00000048111	ENSCAFP00000017996	Uncharacterized protein; Belongs to the tubulin family.	Transcription factor 25; Belongs to the tubulin family.	0.479
ENSCAFP00000048111	TUBB1	ENSCAFP00000048111	ENSCAFP00000061168	Uncharacterized protein; Belongs to the tubulin family.	Tubulin beta 1 class VI; Belongs to the tubulin family.	0.718
ENSCAFP00000048111	TUBB4A	ENSCAFP00000048111	ENSCAFP00000027491	Uncharacterized protein; Belongs to the tubulin family.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.818
ENSCAFP00000048111	TUBB6	ENSCAFP00000048111	ENSCAFP00000043772	Uncharacterized protein; Belongs to the tubulin family.	Tubulin beta 6 class V; Belongs to the tubulin family.	0.542
J9NUU1_CANLF	ENSCAFP00000048111	ENSCAFP00000036931	ENSCAFP00000048111	Tubulin domain-containing protein.	Uncharacterized protein; Belongs to the tubulin family.	0.701
J9NUU1_CANLF	LOC106557476	ENSCAFP00000036931	ENSCAFP00000012688	Tubulin domain-containing protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.711
J9NUU1_CANLF	MAPT	ENSCAFP00000036931	ENSCAFP00000046670	Tubulin domain-containing protein.	Microtubule-associated protein.	0.943
J9NUU1_CANLF	TCF25	ENSCAFP00000036931	ENSCAFP00000017996	Tubulin domain-containing protein.	Transcription factor 25; Belongs to the tubulin family.	0.739
J9NUU1_CANLF	TUBB	ENSCAFP00000036931	ENSCAFP00000000649	Tubulin domain-containing protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.701
J9NUU1_CANLF	TUBB1	ENSCAFP00000036931	ENSCAFP00000061168	Tubulin domain-containing protein.	Tubulin beta 1 class VI; Belongs to the tubulin family.	0.774
J9NUU1_CANLF	TUBB2B	ENSCAFP00000036931	ENSCAFP00000013762	Tubulin domain-containing protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.542
J9NUU1_CANLF	TUBB4A	ENSCAFP00000036931	ENSCAFP00000027491	Tubulin domain-containing protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.542
J9NUU1_CANLF	TUBB4B	ENSCAFP00000036931	ENSCAFP00000046210	Tubulin domain-containing protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.542
LOC106557476	ENSCAFP00000048111	ENSCAFP00000012688	ENSCAFP00000048111	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein; Belongs to the tubulin family.	0.856
LOC106557476	J9NUU1_CANLF	ENSCAFP00000012688	ENSCAFP00000036931	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin domain-containing protein.	0.711
LOC106557476	MAPT	ENSCAFP00000012688	ENSCAFP00000046670	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Microtubule-associated protein.	0.698
LOC106557476	TCF25	ENSCAFP00000012688	ENSCAFP00000017996	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Transcription factor 25; Belongs to the tubulin family.	0.873

page 1 of 5

Server load: low (24%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About