STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBP2Single stranded DNA binding protein 2. (369 aa)    
Predicted Functional Partners:
ZFYVE16
Zinc finger FYVE domain-containing protein.
      
 0.778
LDB1
LIM domain binding 1.
   
 
 0.773
SH3RF3
SH3 domain containing ring finger 3.
    
 
 0.735
LDB2
LIM domain binding 2.
   
 
 0.693
NSMCE1
NSE1 homolog, SMC5-SMC6 complex component.
      
 0.669
LHX4
LIM homeobox 4.
    
 
 0.631
LHX3
LIM homeobox 3.
    
 
 0.619
LHX9
LIM homeobox 9.
    
 
 0.614
TPD52L1
TPD52 like 1.
      
 0.610
TENT2
Terminal nucleotidyltransferase 2.
      
 0.595
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.