STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C15H4orf45Chromosome 15 C4orf45 homolog. (197 aa)    
Predicted Functional Partners:
SPAG8
Sperm associated antigen 8.
  
   0.842
C1H9orf135
Chromosome 1 C9orf135 homolog.
   
   0.782
C9orf116
Chromosome 9 open reading frame 116.
   
   0.774
TEX43
Testis expressed 43.
    
   0.771
TEX49
Testis expressed 49.
    
   0.771
NME7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
    
   0.771
CCDC105
Coiled-coil domain containing 105.
    
   0.771
CCDC173
Coiled-coil domain containing 173.
   
   0.771
EFHB
EF-hand domain family member B.
    
   0.771
TEPP
Testis, prostate and placenta expressed.
    
   0.771
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.