STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM35Tripartite motif containing 35. (493 aa)    
Predicted Functional Partners:
TRIM44
Tripartite motif containing 44.
    
 
 0.786
TRIM66
Tripartite motif containing 66.
   
  
 0.728
TRIM32
Tripartite motif containing 32.
    
 
0.702
TRIM14
Tripartite motif containing 14.
   
 
 0.663
RNF111
Ring finger protein 111.
   
  
 0.598
KCNH8
Potassium voltage-gated channel subfamily H member 8.
   
 
 0.576
CSRNP3
Cysteine and serine rich nuclear protein 3.
      
 0.568
TRIM3
Tripartite motif containing 3.
   
  
0.565
CNOT8
CCR4-NOT transcription complex subunit 8.
   
 
 0.565
TRIM45
Tripartite motif containing 45.
      
 0.517
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.